Adds correlation between time-course relative effects
write.cor.Rd
This uses a Wishart prior as default for modelling the correlation
Usage
write.cor(model, fun, omega = NULL, class.effect = list())
Arguments
- model
A character object of JAGS MBNMA model code
- fun
An object of class
"timefun"
generated (see Details) using any oftloglin()
,tpoly()
,titp()
,temax()
,tfpoly()
,tspline()
ortuser()
- omega
DEPRECATED IN VERSION 0.2.3 ONWARDS (~uniform(-1,1) now used for correlation between parameters rather than a Wishart prior). A scale matrix for the inverse-Wishart prior for the covariance matrix used to model the correlation between time-course parameters (see Details for time-course functions).
omega
must be a symmetric positive definite matrix with dimensions equal to the number of time-course parameters modelled using relative effects (pool="rel"
). If left asNULL
(the default) a diagonal matrix with elements equal to 1 is used.- class.effect
A list of named strings that determines which time-course parameters to model with a class effect and what that effect should be (
"common"
or"random"
). For example:list(emax="common", et50="random")
.